1. Main Theme
2. Konami Logo
3. Main Menu [Shadow Moses]
4. Discovery [Briefing Files]
5. Cavern
6. Encounter [Alert]
7. Encounter [Evasion]
8. Tank Hangar [PS1 Version]
9. Tank Hangar [Beta Version]
10. Holding Cells [Intruder 1]
11. The Armory [Intruder 2]
12. Laboratory [Intruder 3]
13. Mantis' Hymn
14. Colosseo [Commander Room]
15. Husky Caves
16. Hind D
17. Enclosure
18. Game Over
19. Blast Furnace
20. Warehouse, South
21. Rex's Lair [1997 Version]
22. Rex's Lair [1998 Version]
23. Duel [Liquid Snake]
24. Duel [Prototype Remix]
25. Escape from Underground Base
26. Main Menu [VR Missions]
27. Theme of Tara
28. Sneaking Mode [VR Missions]
29. Weapon Mode [PS1 Version]
30. Weapon Mode [Beta Mode]
31. Advance Mode [VR Missions]
32. Alert Mode [VR Missions]
33. Evasion Mode [VR Missions]
34. Mystery Mode [VR Missions]
35. The Truth is Over There [Alert] [VR Missions]
36. The Truth is Over There [Evasion] [VR Missions]
37. Genetic Monster Genolla [VR Missions]
38. Ninja Cyborg [VR Missions]
39. Photo Shoot [Camera Mode]
40. Mission Clear [VR Missions]
41. Mission Failed
42. Control Mix
43. Theme of Solid Snake [Integral Version]
44. Zanzibar Breeze [Integral Version]
45. The Best is Yet to Come
46. The Best is Yet to Come [Instrumental Version]
47. The Best is Yet to Come [Piano Solo]
